Exclude assemblies that were listed for removal for some reason.
Value
The x object where genomes matching the patterns in file have
been removed. For convenience, x is returned unmodified if file is
NULL.
Examples
removeAssemblies(Halo_PercentDiff, textConnection("Halobacterium_\ttest"))
#> Haloferax_mediterranei Haloferax_volcanii
#> Haloferax_mediterranei 0.00000 19.77441
#> Haloferax_volcanii 19.60559 0.00000
#> Salarchaeum_japonicum 31.34071 30.17554
#> Salarchaeum_japonicum
#> Haloferax_mediterranei 31.58067
#> Haloferax_volcanii 30.20358
#> Salarchaeum_japonicum 0.00000
removeAssemblies(Halo_DF, textConnection("Halobacterium_\ttest"))
#> aligned_length_Min
#> Haloferax_mediterranei___Haloferax_volcanii 74
#> Haloferax_mediterranei___Salarchaeum_japonicum 73
#> Haloferax_volcanii___Haloferax_mediterranei 74
#> Haloferax_volcanii___Salarchaeum_japonicum 76
#> Salarchaeum_japonicum___Haloferax_mediterranei 73
#> Salarchaeum_japonicum___Haloferax_volcanii 76
#> aligned_length_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 746.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 576.50
#> Haloferax_volcanii___Haloferax_mediterranei 719.75
#> Haloferax_volcanii___Salarchaeum_japonicum 623.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 556.00
#> Salarchaeum_japonicum___Haloferax_volcanii 621.75
#> aligned_length_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1610.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 955.0
#> Haloferax_volcanii___Haloferax_mediterranei 1550.5
#> Haloferax_volcanii___Salarchaeum_japonicum 1007.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 928.0
#> Salarchaeum_japonicum___Haloferax_volcanii 1000.0
#> aligned_length_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 2682.168
#> Haloferax_mediterranei___Salarchaeum_japonicum 1208.715
#> Haloferax_volcanii___Haloferax_mediterranei 2524.517
#> Haloferax_volcanii___Salarchaeum_japonicum 1326.828
#> Salarchaeum_japonicum___Haloferax_mediterranei 1172.509
#> Salarchaeum_japonicum___Haloferax_volcanii 1322.423
#> aligned_length_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 3720.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 1501.00
#> Haloferax_volcanii___Haloferax_mediterranei 3465.75
#> Haloferax_volcanii___Salarchaeum_japonicum 1670.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 1462.50
#> Salarchaeum_japonicum___Haloferax_volcanii 1664.00
#> aligned_length_Max
#> Haloferax_mediterranei___Haloferax_volcanii 25160
#> Haloferax_mediterranei___Salarchaeum_japonicum 14833
#> Haloferax_volcanii___Haloferax_mediterranei 25163
#> Haloferax_volcanii___Salarchaeum_japonicum 14293
#> Salarchaeum_japonicum___Haloferax_mediterranei 14463
#> Salarchaeum_japonicum___Haloferax_volcanii 14293
#> aligned_length_L50
#> Haloferax_mediterranei___Haloferax_volcanii 5958.171
#> Haloferax_mediterranei___Salarchaeum_japonicum 2116.245
#> Haloferax_volcanii___Haloferax_mediterranei 5510.471
#> Haloferax_volcanii___Salarchaeum_japonicum 2327.514
#> Salarchaeum_japonicum___Haloferax_mediterranei 2054.035
#> Salarchaeum_japonicum___Haloferax_volcanii 2327.443
#> aligned_length_Total
#> Haloferax_mediterranei___Haloferax_volcanii 2556106
#> Haloferax_mediterranei___Salarchaeum_japonicum 1365848
#> Haloferax_volcanii___Haloferax_mediterranei 2544713
#> Haloferax_volcanii___Salarchaeum_japonicum 1456857
#> Salarchaeum_japonicum___Haloferax_mediterranei 1349558
#> Salarchaeum_japonicum___Haloferax_volcanii 1454665
#> aligned_length_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_score_Min
#> Haloferax_mediterranei___Haloferax_volcanii 240
#> Haloferax_mediterranei___Salarchaeum_japonicum 215
#> Haloferax_volcanii___Haloferax_mediterranei 230
#> Haloferax_volcanii___Salarchaeum_japonicum 228
#> Salarchaeum_japonicum___Haloferax_mediterranei 206
#> Salarchaeum_japonicum___Haloferax_volcanii 228
#> aligned_score_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 1650.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 704.25
#> Haloferax_volcanii___Haloferax_mediterranei 1577.50
#> Haloferax_volcanii___Salarchaeum_japonicum 853.25
#> Salarchaeum_japonicum___Haloferax_mediterranei 676.00
#> Salarchaeum_japonicum___Haloferax_volcanii 872.00
#> aligned_score_Median
#> Haloferax_mediterranei___Haloferax_volcanii 4723.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 1388.5
#> Haloferax_volcanii___Haloferax_mediterranei 4587.0
#> Haloferax_volcanii___Salarchaeum_japonicum 1732.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 1316.0
#> Salarchaeum_japonicum___Haloferax_volcanii 1722.0
#> aligned_score_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 7899.460
#> Haloferax_mediterranei___Salarchaeum_japonicum 1857.402
#> Haloferax_volcanii___Haloferax_mediterranei 7333.497
#> Haloferax_volcanii___Salarchaeum_japonicum 2346.982
#> Salarchaeum_japonicum___Haloferax_mediterranei 1783.493
#> Salarchaeum_japonicum___Haloferax_volcanii 2340.934
#> aligned_score_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 10415.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 2364.75
#> Haloferax_volcanii___Haloferax_mediterranei 9797.50
#> Haloferax_volcanii___Salarchaeum_japonicum 2994.75
#> Salarchaeum_japonicum___Haloferax_mediterranei 2271.00
#> Salarchaeum_japonicum___Haloferax_volcanii 2992.50
#> aligned_score_Max
#> Haloferax_mediterranei___Haloferax_volcanii 75210
#> Haloferax_mediterranei___Salarchaeum_japonicum 27372
#> Haloferax_volcanii___Haloferax_mediterranei 73801
#> Haloferax_volcanii___Salarchaeum_japonicum 29447
#> Salarchaeum_japonicum___Haloferax_mediterranei 26708
#> Salarchaeum_japonicum___Haloferax_volcanii 29447
#> aligned_score_L50
#> Haloferax_mediterranei___Haloferax_volcanii 19083.180
#> Haloferax_mediterranei___Salarchaeum_japonicum 3741.876
#> Haloferax_volcanii___Haloferax_mediterranei 17502.790
#> Haloferax_volcanii___Salarchaeum_japonicum 4697.379
#> Salarchaeum_japonicum___Haloferax_mediterranei 3631.220
#> Salarchaeum_japonicum___Haloferax_volcanii 4695.553
#> aligned_score_Total
#> Haloferax_mediterranei___Haloferax_volcanii 7528185
#> Haloferax_mediterranei___Salarchaeum_japonicum 2098864
#> Haloferax_volcanii___Haloferax_mediterranei 7392165
#> Haloferax_volcanii___Salarchaeum_japonicum 2576986
#> Salarchaeum_japonicum___Haloferax_mediterranei 2052800
#> Salarchaeum_japonicum___Haloferax_volcanii 2575027
#> aligned_score_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_matches_Min
#> Haloferax_mediterranei___Haloferax_volcanii 63
#> Haloferax_mediterranei___Salarchaeum_japonicum 67
#> Haloferax_volcanii___Haloferax_mediterranei 63
#> Haloferax_volcanii___Salarchaeum_japonicum 68
#> Salarchaeum_japonicum___Haloferax_mediterranei 66
#> Salarchaeum_japonicum___Haloferax_volcanii 68
#> aligned_matches_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 569.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 374.25
#> Haloferax_volcanii___Haloferax_mediterranei 555.50
#> Haloferax_volcanii___Salarchaeum_japonicum 415.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 365.00
#> Salarchaeum_japonicum___Haloferax_volcanii 412.75
#> aligned_matches_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1294.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 644.5
#> Haloferax_volcanii___Haloferax_mediterranei 1244.5
#> Haloferax_volcanii___Salarchaeum_japonicum 716.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 632.0
#> Salarchaeum_japonicum___Haloferax_volcanii 711.5
#> aligned_matches_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 2151.7849
#> Haloferax_mediterranei___Salarchaeum_japonicum 826.9947
#> Haloferax_volcanii___Haloferax_mediterranei 2029.5704
#> Haloferax_volcanii___Salarchaeum_japonicum 926.0783
#> Salarchaeum_japonicum___Haloferax_mediterranei 805.0365
#> Salarchaeum_japonicum___Haloferax_volcanii 923.3745
#> aligned_matches_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 2962.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 1032.75
#> Haloferax_volcanii___Haloferax_mediterranei 2748.50
#> Haloferax_volcanii___Salarchaeum_japonicum 1154.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 993.50
#> Salarchaeum_japonicum___Haloferax_volcanii 1149.50
#> aligned_matches_Max
#> Haloferax_mediterranei___Haloferax_volcanii 20232
#> Haloferax_mediterranei___Salarchaeum_japonicum 10754
#> Haloferax_volcanii___Haloferax_mediterranei 20237
#> Haloferax_volcanii___Salarchaeum_japonicum 10466
#> Salarchaeum_japonicum___Haloferax_mediterranei 10566
#> Salarchaeum_japonicum___Haloferax_volcanii 10466
#> aligned_matches_L50
#> Haloferax_mediterranei___Haloferax_volcanii 4890.974
#> Haloferax_mediterranei___Salarchaeum_japonicum 1479.060
#> Haloferax_volcanii___Haloferax_mediterranei 4535.163
#> Haloferax_volcanii___Salarchaeum_japonicum 1653.034
#> Salarchaeum_japonicum___Haloferax_mediterranei 1443.765
#> Salarchaeum_japonicum___Haloferax_volcanii 1653.060
#> aligned_matches_Total
#> Haloferax_mediterranei___Haloferax_volcanii 2050651
#> Haloferax_mediterranei___Salarchaeum_japonicum 934504
#> Haloferax_volcanii___Haloferax_mediterranei 2045807
#> Haloferax_volcanii___Salarchaeum_japonicum 1016834
#> Salarchaeum_japonicum___Haloferax_mediterranei 926597
#> Salarchaeum_japonicum___Haloferax_volcanii 1015712
#> aligned_matches_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_mismatches_Min
#> Haloferax_mediterranei___Haloferax_volcanii 5
#> Haloferax_mediterranei___Salarchaeum_japonicum 4
#> Haloferax_volcanii___Haloferax_mediterranei 5
#> Haloferax_volcanii___Salarchaeum_japonicum 2
#> Salarchaeum_japonicum___Haloferax_mediterranei 2
#> Salarchaeum_japonicum___Haloferax_volcanii 2
#> aligned_mismatches_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 134.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 173.25
#> Haloferax_volcanii___Haloferax_mediterranei 131.00
#> Haloferax_volcanii___Salarchaeum_japonicum 171.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 168.50
#> Salarchaeum_japonicum___Haloferax_volcanii 170.75
#> aligned_mismatches_Median
#> Haloferax_mediterranei___Haloferax_volcanii 282.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 277.0
#> Haloferax_volcanii___Haloferax_mediterranei 273.5
#> Haloferax_volcanii___Salarchaeum_japonicum 272.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 271.0
#> Salarchaeum_japonicum___Haloferax_volcanii 271.5
#> aligned_mismatches_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 442.9014
#> Haloferax_mediterranei___Salarchaeum_japonicum 345.5982
#> Haloferax_volcanii___Haloferax_mediterranei 414.0972
#> Haloferax_volcanii___Salarchaeum_japonicum 351.1466
#> Salarchaeum_japonicum___Haloferax_mediterranei 333.7072
#> Salarchaeum_japonicum___Haloferax_volcanii 350.0455
#> aligned_mismatches_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 607.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 425.00
#> Haloferax_volcanii___Haloferax_mediterranei 560.25
#> Haloferax_volcanii___Salarchaeum_japonicum 441.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 417.00
#> Salarchaeum_japonicum___Haloferax_volcanii 437.00
#> aligned_mismatches_Max
#> Haloferax_mediterranei___Haloferax_volcanii 3943
#> Haloferax_mediterranei___Salarchaeum_japonicum 3521
#> Haloferax_volcanii___Haloferax_mediterranei 3935
#> Haloferax_volcanii___Salarchaeum_japonicum 3202
#> Salarchaeum_japonicum___Haloferax_mediterranei 3434
#> Salarchaeum_japonicum___Haloferax_volcanii 3202
#> aligned_mismatches_L50
#> Haloferax_mediterranei___Haloferax_volcanii 925.8603
#> Haloferax_mediterranei___Salarchaeum_japonicum 575.4526
#> Haloferax_volcanii___Haloferax_mediterranei 852.2381
#> Haloferax_volcanii___Salarchaeum_japonicum 592.0136
#> Salarchaeum_japonicum___Haloferax_mediterranei 553.8452
#> Salarchaeum_japonicum___Haloferax_volcanii 592.4919
#> aligned_mismatches_Total
#> Haloferax_mediterranei___Haloferax_volcanii 422085
#> Haloferax_mediterranei___Salarchaeum_japonicum 390526
#> Haloferax_volcanii___Haloferax_mediterranei 417410
#> Haloferax_volcanii___Salarchaeum_japonicum 385559
#> Salarchaeum_japonicum___Haloferax_mediterranei 384097
#> Salarchaeum_japonicum___Haloferax_volcanii 385050
#> aligned_mismatches_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_gaps_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 0
#> Haloferax_mediterranei___Salarchaeum_japonicum 0
#> Haloferax_volcanii___Haloferax_mediterranei 0
#> Haloferax_volcanii___Salarchaeum_japonicum 0
#> Salarchaeum_japonicum___Haloferax_mediterranei 0
#> Salarchaeum_japonicum___Haloferax_volcanii 0
#> aligned_gaps_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 0
#> Haloferax_mediterranei___Salarchaeum_japonicum 0
#> Haloferax_volcanii___Haloferax_mediterranei 0
#> Haloferax_volcanii___Salarchaeum_japonicum 0
#> Salarchaeum_japonicum___Haloferax_mediterranei 0
#> Salarchaeum_japonicum___Haloferax_volcanii 0
#> aligned_gaps_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 18
#> Haloferax_mediterranei___Salarchaeum_japonicum 3
#> Haloferax_volcanii___Haloferax_mediterranei 12
#> Haloferax_volcanii___Salarchaeum_japonicum 3
#> Salarchaeum_japonicum___Haloferax_mediterranei 6
#> Salarchaeum_japonicum___Haloferax_volcanii 9
#> aligned_gaps_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 45.846800
#> Haloferax_mediterranei___Salarchaeum_japonicum 9.142478
#> Haloferax_volcanii___Haloferax_mediterranei 38.404762
#> Haloferax_volcanii___Salarchaeum_japonicum 12.385246
#> Salarchaeum_japonicum___Haloferax_mediterranei 24.985230
#> Salarchaeum_japonicum___Haloferax_volcanii 36.651818
#> aligned_gaps_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 68.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 9.00
#> Haloferax_volcanii___Haloferax_mediterranei 54.25
#> Haloferax_volcanii___Salarchaeum_japonicum 15.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 30.00
#> Salarchaeum_japonicum___Haloferax_volcanii 43.00
#> aligned_gaps_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 659
#> Haloferax_mediterranei___Salarchaeum_japonicum 228
#> Haloferax_volcanii___Haloferax_mediterranei 524
#> Haloferax_volcanii___Salarchaeum_japonicum 172
#> Salarchaeum_japonicum___Haloferax_mediterranei 389
#> Salarchaeum_japonicum___Haloferax_volcanii 607
#> aligned_gaps_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 143.48732
#> Haloferax_mediterranei___Salarchaeum_japonicum 45.83187
#> Haloferax_volcanii___Haloferax_mediterranei 134.50589
#> Haloferax_volcanii___Salarchaeum_japonicum 53.00059
#> Salarchaeum_japonicum___Haloferax_mediterranei 104.50734
#> Salarchaeum_japonicum___Haloferax_volcanii 143.50475
#> aligned_gaps_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 43692
#> Haloferax_mediterranei___Salarchaeum_japonicum 10331
#> Haloferax_volcanii___Haloferax_mediterranei 38712
#> Haloferax_volcanii___Salarchaeum_japonicum 13599
#> Salarchaeum_japonicum___Haloferax_mediterranei 28758
#> Salarchaeum_japonicum___Haloferax_volcanii 40317
#> aligned_gaps_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_gaps_query_Min
#> Haloferax_mediterranei___Haloferax_volcanii 0
#> Haloferax_mediterranei___Salarchaeum_japonicum 0
#> Haloferax_volcanii___Haloferax_mediterranei 0
#> Haloferax_volcanii___Salarchaeum_japonicum 0
#> Salarchaeum_japonicum___Haloferax_mediterranei 0
#> Salarchaeum_japonicum___Haloferax_volcanii 0
#> aligned_gaps_query_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 0
#> Haloferax_mediterranei___Salarchaeum_japonicum 0
#> Haloferax_volcanii___Haloferax_mediterranei 0
#> Haloferax_volcanii___Salarchaeum_japonicum 0
#> Salarchaeum_japonicum___Haloferax_mediterranei 0
#> Salarchaeum_japonicum___Haloferax_volcanii 0
#> aligned_gaps_query_Median
#> Haloferax_mediterranei___Haloferax_volcanii 14
#> Haloferax_mediterranei___Salarchaeum_japonicum 6
#> Haloferax_volcanii___Haloferax_mediterranei 17
#> Haloferax_volcanii___Salarchaeum_japonicum 9
#> Salarchaeum_japonicum___Haloferax_mediterranei 3
#> Salarchaeum_japonicum___Haloferax_volcanii 3
#> aligned_gaps_query_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 41.634837
#> Haloferax_mediterranei___Salarchaeum_japonicum 26.979646
#> Haloferax_volcanii___Haloferax_mediterranei 42.444444
#> Haloferax_volcanii___Salarchaeum_japonicum 37.217669
#> Salarchaeum_japonicum___Haloferax_mediterranei 8.780191
#> Salarchaeum_japonicum___Haloferax_volcanii 12.350909
#> aligned_gaps_query_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 61
#> Haloferax_mediterranei___Salarchaeum_japonicum 33
#> Haloferax_volcanii___Haloferax_mediterranei 66
#> Haloferax_volcanii___Salarchaeum_japonicum 45
#> Salarchaeum_japonicum___Haloferax_mediterranei 9
#> Salarchaeum_japonicum___Haloferax_volcanii 15
#> aligned_gaps_query_Max
#> Haloferax_mediterranei___Haloferax_volcanii 583
#> Haloferax_mediterranei___Salarchaeum_japonicum 389
#> Haloferax_volcanii___Haloferax_mediterranei 500
#> Haloferax_volcanii___Salarchaeum_japonicum 607
#> Salarchaeum_japonicum___Haloferax_mediterranei 219
#> Salarchaeum_japonicum___Haloferax_volcanii 172
#> aligned_gaps_query_L50
#> Haloferax_mediterranei___Haloferax_volcanii 145.08635
#> Haloferax_mediterranei___Salarchaeum_japonicum 109.16997
#> Haloferax_volcanii___Haloferax_mediterranei 131.01538
#> Haloferax_volcanii___Salarchaeum_japonicum 145.26130
#> Salarchaeum_japonicum___Haloferax_mediterranei 43.67346
#> Salarchaeum_japonicum___Haloferax_volcanii 52.73841
#> aligned_gaps_query_Total
#> Haloferax_mediterranei___Haloferax_volcanii 39678
#> Haloferax_mediterranei___Salarchaeum_japonicum 30487
#> Haloferax_volcanii___Haloferax_mediterranei 42784
#> Haloferax_volcanii___Salarchaeum_japonicum 40865
#> Salarchaeum_japonicum___Haloferax_mediterranei 10106
#> Salarchaeum_japonicum___Haloferax_volcanii 13586
#> aligned_gaps_query_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> matching_aligned_Min
#> Haloferax_mediterranei___Haloferax_volcanii 52.90023
#> Haloferax_mediterranei___Salarchaeum_japonicum 52.41546
#> Haloferax_volcanii___Haloferax_mediterranei 53.13225
#> Haloferax_volcanii___Salarchaeum_japonicum 51.78947
#> Salarchaeum_japonicum___Haloferax_mediterranei 53.66064
#> Salarchaeum_japonicum___Haloferax_volcanii 51.78947
#> matching_aligned_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 74.78782
#> Haloferax_mediterranei___Salarchaeum_japonicum 64.08138
#> Haloferax_volcanii___Haloferax_mediterranei 75.07866
#> Haloferax_volcanii___Salarchaeum_japonicum 65.19404
#> Salarchaeum_japonicum___Haloferax_mediterranei 64.15717
#> Salarchaeum_japonicum___Haloferax_volcanii 65.22348
#> matching_aligned_Median
#> Haloferax_mediterranei___Haloferax_volcanii 79.68406
#> Haloferax_mediterranei___Salarchaeum_japonicum 68.10844
#> Haloferax_volcanii___Haloferax_mediterranei 79.88252
#> Haloferax_volcanii___Salarchaeum_japonicum 69.96189
#> Salarchaeum_japonicum___Haloferax_mediterranei 68.15642
#> Salarchaeum_japonicum___Haloferax_volcanii 69.95580
#> matching_aligned_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 78.71297
#> Haloferax_mediterranei___Salarchaeum_japonicum 68.39704
#> Haloferax_volcanii___Haloferax_mediterranei 78.90081
#> Haloferax_volcanii___Salarchaeum_japonicum 69.84104
#> Salarchaeum_japonicum___Haloferax_mediterranei 68.64037
#> Salarchaeum_japonicum___Haloferax_volcanii 69.89502
#> matching_aligned_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 83.15878
#> Haloferax_mediterranei___Salarchaeum_japonicum 72.62597
#> Haloferax_volcanii___Haloferax_mediterranei 83.31480
#> Haloferax_volcanii___Salarchaeum_japonicum 74.65226
#> Salarchaeum_japonicum___Haloferax_mediterranei 72.96992
#> Salarchaeum_japonicum___Haloferax_volcanii 74.80632
#> matching_aligned_Max
#> Haloferax_mediterranei___Haloferax_volcanii 95.67901
#> Haloferax_mediterranei___Salarchaeum_japonicum 95.18072
#> Haloferax_volcanii___Haloferax_mediterranei 95.67901
#> Haloferax_volcanii___Salarchaeum_japonicum 93.50649
#> Salarchaeum_japonicum___Haloferax_mediterranei 97.56098
#> Salarchaeum_japonicum___Haloferax_volcanii 93.50649
#> matching_aligned_L50
#> Haloferax_mediterranei___Haloferax_volcanii 79.32679
#> Haloferax_mediterranei___Salarchaeum_japonicum 68.94639
#> Haloferax_volcanii___Haloferax_mediterranei 79.50551
#> Haloferax_volcanii___Salarchaeum_japonicum 70.44902
#> Salarchaeum_japonicum___Haloferax_mediterranei 69.19829
#> Salarchaeum_japonicum___Haloferax_volcanii 70.50668
#> matching_aligned_Total
#> Haloferax_mediterranei___Haloferax_volcanii 75013.47
#> Haloferax_mediterranei___Salarchaeum_japonicum 77288.65
#> Haloferax_volcanii___Haloferax_mediterranei 79532.01
#> Haloferax_volcanii___Salarchaeum_japonicum 76685.47
#> Salarchaeum_japonicum___Haloferax_mediterranei 79005.06
#> Salarchaeum_japonicum___Haloferax_volcanii 76884.52
#> matching_aligned_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> matching_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 52.90023
#> Haloferax_mediterranei___Salarchaeum_japonicum 52.41546
#> Haloferax_volcanii___Haloferax_mediterranei 56.52174
#> Haloferax_volcanii___Salarchaeum_japonicum 52.38095
#> Salarchaeum_japonicum___Haloferax_mediterranei 55.13699
#> Salarchaeum_japonicum___Haloferax_volcanii 54.42478
#> matching_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 76.05156
#> Haloferax_mediterranei___Salarchaeum_japonicum 64.61507
#> Haloferax_volcanii___Haloferax_mediterranei 76.22829
#> Haloferax_volcanii___Salarchaeum_japonicum 65.90759
#> Salarchaeum_japonicum___Haloferax_mediterranei 65.74891
#> Salarchaeum_japonicum___Haloferax_volcanii 67.43133
#> matching_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 80.91865
#> Haloferax_mediterranei___Salarchaeum_japonicum 68.59919
#> Haloferax_volcanii___Haloferax_mediterranei 80.94685
#> Haloferax_volcanii___Salarchaeum_japonicum 70.35019
#> Salarchaeum_japonicum___Haloferax_mediterranei 69.59911
#> Salarchaeum_japonicum___Haloferax_volcanii 71.41293
#> matching_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 79.85758
#> Haloferax_mediterranei___Salarchaeum_japonicum 68.83815
#> Haloferax_volcanii___Haloferax_mediterranei 79.99481
#> Haloferax_volcanii___Salarchaeum_japonicum 70.41026
#> Salarchaeum_japonicum___Haloferax_mediterranei 69.78450
#> Salarchaeum_japonicum___Haloferax_volcanii 71.41538
#> matching_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 84.26966
#> Haloferax_mediterranei___Salarchaeum_japonicum 72.99229
#> Haloferax_volcanii___Haloferax_mediterranei 84.40447
#> Haloferax_volcanii___Salarchaeum_japonicum 75.09786
#> Salarchaeum_japonicum___Haloferax_mediterranei 73.62416
#> Salarchaeum_japonicum___Haloferax_volcanii 75.37736
#> matching_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 96.67897
#> Haloferax_mediterranei___Salarchaeum_japonicum 95.18072
#> Haloferax_volcanii___Haloferax_mediterranei 95.67901
#> Haloferax_volcanii___Salarchaeum_japonicum 93.50649
#> Salarchaeum_japonicum___Haloferax_mediterranei 97.56098
#> Salarchaeum_japonicum___Haloferax_volcanii 97.33333
#> matching_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 80.41330
#> Haloferax_mediterranei___Salarchaeum_japonicum 69.35864
#> Haloferax_volcanii___Haloferax_mediterranei 80.52351
#> Haloferax_volcanii___Salarchaeum_japonicum 70.96192
#> Salarchaeum_japonicum___Haloferax_mediterranei 70.27146
#> Salarchaeum_japonicum___Haloferax_volcanii 71.91560
#> matching_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 76104.28
#> Haloferax_mediterranei___Salarchaeum_japonicum 77787.11
#> Haloferax_volcanii___Haloferax_mediterranei 80634.77
#> Haloferax_volcanii___Salarchaeum_japonicum 77310.47
#> Salarchaeum_japonicum___Haloferax_mediterranei 80321.96
#> Salarchaeum_japonicum___Haloferax_volcanii 78556.91
#> matching_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> matching_query_Min
#> Haloferax_mediterranei___Haloferax_volcanii 56.43225
#> Haloferax_mediterranei___Salarchaeum_japonicum 56.20525
#> Haloferax_volcanii___Haloferax_mediterranei 53.13225
#> Haloferax_volcanii___Salarchaeum_japonicum 54.42478
#> Salarchaeum_japonicum___Haloferax_mediterranei 53.75626
#> Salarchaeum_japonicum___Haloferax_volcanii 52.38095
#> matching_query_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 76.02502
#> Haloferax_mediterranei___Salarchaeum_japonicum 65.68204
#> Haloferax_volcanii___Haloferax_mediterranei 76.15459
#> Haloferax_volcanii___Salarchaeum_japonicum 67.33386
#> Salarchaeum_japonicum___Haloferax_mediterranei 64.69877
#> Salarchaeum_japonicum___Haloferax_volcanii 65.89164
#> matching_query_Median
#> Haloferax_mediterranei___Haloferax_volcanii 80.79242
#> Haloferax_mediterranei___Salarchaeum_japonicum 69.48515
#> Haloferax_volcanii___Haloferax_mediterranei 80.98610
#> Haloferax_volcanii___Salarchaeum_japonicum 71.41293
#> Salarchaeum_japonicum___Haloferax_mediterranei 68.73385
#> Salarchaeum_japonicum___Haloferax_volcanii 70.35019
#> matching_query_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 79.82877
#> Haloferax_mediterranei___Salarchaeum_japonicum 69.60561
#> Haloferax_volcanii___Haloferax_mediterranei 80.04517
#> Haloferax_volcanii___Salarchaeum_japonicum 71.37900
#> Salarchaeum_japonicum___Haloferax_mediterranei 69.08725
#> Salarchaeum_japonicum___Haloferax_volcanii 70.46631
#> matching_query_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 84.12789
#> Haloferax_mediterranei___Salarchaeum_japonicum 73.43798
#> Haloferax_volcanii___Haloferax_mediterranei 84.40956
#> Haloferax_volcanii___Salarchaeum_japonicum 75.34778
#> Salarchaeum_japonicum___Haloferax_mediterranei 73.15417
#> Salarchaeum_japonicum___Haloferax_volcanii 75.16252
#> matching_query_Max
#> Haloferax_mediterranei___Haloferax_volcanii 95.67901
#> Haloferax_mediterranei___Salarchaeum_japonicum 95.18072
#> Haloferax_volcanii___Haloferax_mediterranei 96.79012
#> Haloferax_volcanii___Salarchaeum_japonicum 97.33333
#> Salarchaeum_japonicum___Haloferax_mediterranei 97.56098
#> Salarchaeum_japonicum___Haloferax_volcanii 93.50649
#> matching_query_L50
#> Haloferax_mediterranei___Haloferax_volcanii 80.37374
#> Haloferax_mediterranei___Salarchaeum_japonicum 70.08205
#> Haloferax_volcanii___Haloferax_mediterranei 80.58373
#> Haloferax_volcanii___Salarchaeum_japonicum 71.87340
#> Salarchaeum_japonicum___Haloferax_mediterranei 69.61349
#> Salarchaeum_japonicum___Haloferax_volcanii 71.02093
#> matching_query_Total
#> Haloferax_mediterranei___Haloferax_volcanii 76076.82
#> Haloferax_mediterranei___Salarchaeum_japonicum 78654.34
#> Haloferax_volcanii___Haloferax_mediterranei 80685.54
#> Haloferax_volcanii___Salarchaeum_japonicum 78374.14
#> Salarchaeum_japonicum___Haloferax_mediterranei 79519.42
#> Salarchaeum_japonicum___Haloferax_volcanii 77512.94
#> matching_query_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> mismatching_aligned_Min
#> Haloferax_mediterranei___Haloferax_volcanii 2.751323
#> Haloferax_mediterranei___Salarchaeum_japonicum 4.819277
#> Haloferax_volcanii___Haloferax_mediterranei 2.653928
#> Haloferax_volcanii___Salarchaeum_japonicum 1.886793
#> Salarchaeum_japonicum___Haloferax_mediterranei 2.439024
#> Salarchaeum_japonicum___Haloferax_volcanii 1.886793
#> mismatching_aligned_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 14.14309
#> Haloferax_mediterranei___Salarchaeum_japonicum 25.81230
#> Haloferax_volcanii___Haloferax_mediterranei 14.10280
#> Haloferax_volcanii___Salarchaeum_japonicum 23.65107
#> Salarchaeum_japonicum___Haloferax_mediterranei 25.66374
#> Salarchaeum_japonicum___Haloferax_volcanii 23.64900
#> mismatching_aligned_Median
#> Haloferax_mediterranei___Haloferax_volcanii 17.09457
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.20050
#> Haloferax_volcanii___Haloferax_mediterranei 17.00347
#> Haloferax_volcanii___Salarchaeum_japonicum 27.02454
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.08574
#> Salarchaeum_japonicum___Haloferax_volcanii 26.97642
#> mismatching_aligned_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 18.41975
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.18578
#> Haloferax_volcanii___Haloferax_mediterranei 18.25513
#> Haloferax_volcanii___Salarchaeum_japonicum 27.12189
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.03155
#> Salarchaeum_japonicum___Haloferax_volcanii 27.09219
#> mismatching_aligned_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 22.08835
#> Haloferax_mediterranei___Salarchaeum_japonicum 32.68647
#> Haloferax_volcanii___Haloferax_mediterranei 21.72222
#> Haloferax_volcanii___Salarchaeum_japonicum 30.56465
#> Salarchaeum_japonicum___Haloferax_mediterranei 32.67269
#> Salarchaeum_japonicum___Haloferax_volcanii 30.52172
#> mismatching_aligned_Max
#> Haloferax_mediterranei___Haloferax_volcanii 38.06147
#> Haloferax_mediterranei___Salarchaeum_japonicum 43.02521
#> Haloferax_volcanii___Haloferax_mediterranei 36.30363
#> Haloferax_volcanii___Salarchaeum_japonicum 42.26519
#> Salarchaeum_japonicum___Haloferax_mediterranei 43.73957
#> Salarchaeum_japonicum___Haloferax_volcanii 44.33735
#> mismatching_aligned_L50
#> Haloferax_mediterranei___Haloferax_volcanii 20.49908
#> Haloferax_mediterranei___Salarchaeum_japonicum 30.19180
#> Haloferax_volcanii___Haloferax_mediterranei 20.25763
#> Haloferax_volcanii___Salarchaeum_japonicum 28.16744
#> Salarchaeum_japonicum___Haloferax_mediterranei 30.06690
#> Salarchaeum_japonicum___Haloferax_volcanii 28.15517
#> mismatching_aligned_Total
#> Haloferax_mediterranei___Haloferax_volcanii 17554.02
#> Haloferax_mediterranei___Salarchaeum_japonicum 32979.93
#> Haloferax_volcanii___Haloferax_mediterranei 18401.17
#> Haloferax_volcanii___Salarchaeum_japonicum 29779.84
#> Salarchaeum_japonicum___Haloferax_mediterranei 33415.31
#> Salarchaeum_japonicum___Haloferax_volcanii 29801.41
#> mismatching_aligned_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> mismatching_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 3.198032
#> Haloferax_mediterranei___Salarchaeum_japonicum 4.819277
#> Haloferax_volcanii___Haloferax_mediterranei 2.656748
#> Haloferax_volcanii___Salarchaeum_japonicum 1.886793
#> Salarchaeum_japonicum___Haloferax_mediterranei 2.439024
#> Salarchaeum_japonicum___Haloferax_volcanii 2.666667
#> mismatching_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 14.39040
#> Haloferax_mediterranei___Salarchaeum_japonicum 25.94564
#> Haloferax_volcanii___Haloferax_mediterranei 14.23126
#> Haloferax_volcanii___Salarchaeum_japonicum 23.82663
#> Salarchaeum_japonicum___Haloferax_mediterranei 25.98895
#> Salarchaeum_japonicum___Haloferax_volcanii 24.06458
#> mismatching_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 17.39290
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.47632
#> Haloferax_volcanii___Haloferax_mediterranei 17.30190
#> Haloferax_volcanii___Salarchaeum_japonicum 27.19208
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.79323
#> Salarchaeum_japonicum___Haloferax_volcanii 27.75060
#> mismatching_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 18.69824
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.38789
#> Haloferax_volcanii___Haloferax_mediterranei 18.51315
#> Haloferax_volcanii___Salarchaeum_japonicum 27.37020
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.53663
#> Salarchaeum_japonicum___Haloferax_volcanii 27.71564
#> mismatching_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 22.53521
#> Haloferax_mediterranei___Salarchaeum_japonicum 33.00406
#> Haloferax_volcanii___Haloferax_mediterranei 22.02030
#> Haloferax_volcanii___Salarchaeum_japonicum 30.85907
#> Salarchaeum_japonicum___Haloferax_mediterranei 33.50436
#> Salarchaeum_japonicum___Haloferax_volcanii 31.45826
#> mismatching_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 38.88889
#> Haloferax_mediterranei___Salarchaeum_japonicum 43.05136
#> Haloferax_volcanii___Haloferax_mediterranei 36.30363
#> Haloferax_volcanii___Salarchaeum_japonicum 42.26519
#> Salarchaeum_japonicum___Haloferax_mediterranei 44.86301
#> Salarchaeum_japonicum___Haloferax_volcanii 44.33735
#> mismatching_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 20.80722
#> Haloferax_mediterranei___Salarchaeum_japonicum 30.41317
#> Haloferax_volcanii___Haloferax_mediterranei 20.53047
#> Haloferax_volcanii___Salarchaeum_japonicum 28.45336
#> Salarchaeum_japonicum___Haloferax_mediterranei 30.59334
#> Salarchaeum_japonicum___Haloferax_volcanii 28.82060
#> mismatching_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 17819.42
#> Haloferax_mediterranei___Salarchaeum_japonicum 33208.31
#> Haloferax_volcanii___Haloferax_mediterranei 18661.25
#> Haloferax_volcanii___Salarchaeum_japonicum 30052.48
#> Salarchaeum_japonicum___Haloferax_mediterranei 33996.66
#> Salarchaeum_japonicum___Haloferax_volcanii 30487.20
#> mismatching_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> mismatching_query_Min
#> Haloferax_mediterranei___Haloferax_volcanii 2.754237
#> Haloferax_mediterranei___Salarchaeum_japonicum 4.819277
#> Haloferax_volcanii___Haloferax_mediterranei 3.086420
#> Haloferax_volcanii___Salarchaeum_japonicum 2.666667
#> Salarchaeum_japonicum___Haloferax_mediterranei 2.439024
#> Salarchaeum_japonicum___Haloferax_volcanii 1.886793
#> mismatching_query_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 14.27908
#> Haloferax_mediterranei___Salarchaeum_japonicum 26.07885
#> Haloferax_volcanii___Haloferax_mediterranei 14.33766
#> Haloferax_volcanii___Salarchaeum_japonicum 24.11825
#> Salarchaeum_japonicum___Haloferax_mediterranei 25.90856
#> Salarchaeum_japonicum___Haloferax_volcanii 23.81305
#> mismatching_query_Median
#> Haloferax_mediterranei___Haloferax_volcanii 17.42101
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.87798
#> Haloferax_volcanii___Haloferax_mediterranei 17.21565
#> Haloferax_volcanii___Salarchaeum_japonicum 27.76514
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.35780
#> Salarchaeum_japonicum___Haloferax_volcanii 27.15090
#> mismatching_query_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 18.68376
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.72322
#> Haloferax_volcanii___Haloferax_mediterranei 18.53263
#> Haloferax_volcanii___Salarchaeum_japonicum 27.75442
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.23555
#> Salarchaeum_japonicum___Haloferax_volcanii 27.34125
#> mismatching_query_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 22.25705
#> Haloferax_mediterranei___Salarchaeum_japonicum 33.55049
#> Haloferax_volcanii___Haloferax_mediterranei 21.97991
#> Haloferax_volcanii___Salarchaeum_japonicum 31.55881
#> Salarchaeum_japonicum___Haloferax_mediterranei 32.92805
#> Salarchaeum_japonicum___Haloferax_volcanii 30.81705
#> mismatching_query_Max
#> Haloferax_mediterranei___Haloferax_volcanii 38.88889
#> Haloferax_mediterranei___Salarchaeum_japonicum 43.24324
#> Haloferax_volcanii___Haloferax_mediterranei 36.30363
#> Haloferax_volcanii___Salarchaeum_japonicum 42.60090
#> Salarchaeum_japonicum___Haloferax_mediterranei 43.73957
#> Salarchaeum_japonicum___Haloferax_volcanii 44.33735
#> mismatching_query_L50
#> Haloferax_mediterranei___Haloferax_volcanii 20.77580
#> Haloferax_mediterranei___Salarchaeum_japonicum 30.75157
#> Haloferax_volcanii___Haloferax_mediterranei 20.56654
#> Haloferax_volcanii___Salarchaeum_japonicum 28.84444
#> Salarchaeum_japonicum___Haloferax_mediterranei 30.29074
#> Salarchaeum_japonicum___Haloferax_volcanii 28.44225
#> mismatching_query_Total
#> Haloferax_mediterranei___Haloferax_volcanii 17805.63
#> Haloferax_mediterranei___Salarchaeum_japonicum 33587.24
#> Haloferax_volcanii___Haloferax_mediterranei 18680.90
#> Haloferax_volcanii___Salarchaeum_japonicum 30474.35
#> Salarchaeum_japonicum___Haloferax_mediterranei 33650.12
#> Salarchaeum_japonicum___Haloferax_volcanii 30075.38
#> mismatching_query_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 74
#> Haloferax_mediterranei___Salarchaeum_japonicum 73
#> Haloferax_volcanii___Haloferax_mediterranei 74
#> Haloferax_volcanii___Salarchaeum_japonicum 76
#> Salarchaeum_japonicum___Haloferax_mediterranei 73
#> Salarchaeum_japonicum___Haloferax_volcanii 75
#> aligned_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 739.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 572.25
#> Haloferax_volcanii___Haloferax_mediterranei 713.00
#> Haloferax_volcanii___Salarchaeum_japonicum 618.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 547.00
#> Salarchaeum_japonicum___Haloferax_volcanii 606.75
#> aligned_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1583.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 949.5
#> Haloferax_volcanii___Haloferax_mediterranei 1519.0
#> Haloferax_volcanii___Salarchaeum_japonicum 997.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 925.0
#> Salarchaeum_japonicum___Haloferax_volcanii 982.0
#> aligned_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 2636.321
#> Haloferax_mediterranei___Salarchaeum_japonicum 1199.573
#> Haloferax_volcanii___Haloferax_mediterranei 2486.112
#> Haloferax_volcanii___Salarchaeum_japonicum 1314.443
#> Salarchaeum_japonicum___Haloferax_mediterranei 1147.524
#> Salarchaeum_japonicum___Haloferax_volcanii 1285.771
#> aligned_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 3661.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 1493.50
#> Haloferax_volcanii___Haloferax_mediterranei 3406.75
#> Haloferax_volcanii___Salarchaeum_japonicum 1645.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 1447.50
#> Salarchaeum_japonicum___Haloferax_volcanii 1618.50
#> aligned_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 24678
#> Haloferax_mediterranei___Salarchaeum_japonicum 14605
#> Haloferax_volcanii___Haloferax_mediterranei 24657
#> Haloferax_volcanii___Salarchaeum_japonicum 14121
#> Salarchaeum_japonicum___Haloferax_mediterranei 14219
#> Salarchaeum_japonicum___Haloferax_volcanii 13840
#> aligned_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 5855.103
#> Haloferax_mediterranei___Salarchaeum_japonicum 2094.926
#> Haloferax_volcanii___Haloferax_mediterranei 5424.008
#> Haloferax_volcanii___Salarchaeum_japonicum 2303.184
#> Salarchaeum_japonicum___Haloferax_mediterranei 1996.224
#> Salarchaeum_japonicum___Haloferax_volcanii 2243.422
#> aligned_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 2512414
#> Haloferax_mediterranei___Salarchaeum_japonicum 1355517
#> Haloferax_volcanii___Haloferax_mediterranei 2506001
#> Haloferax_volcanii___Salarchaeum_japonicum 1443258
#> Salarchaeum_japonicum___Haloferax_mediterranei 1320800
#> Salarchaeum_japonicum___Haloferax_volcanii 1414348
#> aligned_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> aligned_width_query_Min
#> Haloferax_mediterranei___Haloferax_volcanii 74
#> Haloferax_mediterranei___Salarchaeum_japonicum 73
#> Haloferax_volcanii___Haloferax_mediterranei 74
#> Haloferax_volcanii___Salarchaeum_japonicum 75
#> Salarchaeum_japonicum___Haloferax_mediterranei 73
#> Salarchaeum_japonicum___Haloferax_volcanii 76
#> aligned_width_query_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 740.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 567.25
#> Haloferax_volcanii___Haloferax_mediterranei 710.00
#> Haloferax_volcanii___Salarchaeum_japonicum 607.50
#> Salarchaeum_japonicum___Haloferax_mediterranei 546.50
#> Salarchaeum_japonicum___Haloferax_volcanii 617.00
#> aligned_width_query_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1585.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 940.5
#> Haloferax_volcanii___Haloferax_mediterranei 1529.5
#> Haloferax_volcanii___Salarchaeum_japonicum 984.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 925.0
#> Salarchaeum_japonicum___Haloferax_volcanii 994.5
#> aligned_width_query_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 2640.533
#> Haloferax_mediterranei___Salarchaeum_japonicum 1181.735
#> Haloferax_volcanii___Haloferax_mediterranei 2482.072
#> Haloferax_volcanii___Salarchaeum_japonicum 1289.610
#> Salarchaeum_japonicum___Haloferax_mediterranei 1163.729
#> Salarchaeum_japonicum___Haloferax_volcanii 1310.072
#> aligned_width_query_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 3674.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 1472.00
#> Haloferax_volcanii___Haloferax_mediterranei 3403.00
#> Haloferax_volcanii___Salarchaeum_japonicum 1621.50
#> Salarchaeum_japonicum___Haloferax_mediterranei 1453.50
#> Salarchaeum_japonicum___Haloferax_volcanii 1644.25
#> aligned_width_query_Max
#> Haloferax_mediterranei___Haloferax_volcanii 24657
#> Haloferax_mediterranei___Salarchaeum_japonicum 14503
#> Haloferax_volcanii___Haloferax_mediterranei 24678
#> Haloferax_volcanii___Salarchaeum_japonicum 13840
#> Salarchaeum_japonicum___Haloferax_mediterranei 14244
#> Salarchaeum_japonicum___Haloferax_volcanii 14121
#> aligned_width_query_L50
#> Haloferax_mediterranei___Haloferax_volcanii 5862.763
#> Haloferax_mediterranei___Salarchaeum_japonicum 2053.436
#> Haloferax_volcanii___Haloferax_mediterranei 5418.920
#> Haloferax_volcanii___Salarchaeum_japonicum 2242.932
#> Salarchaeum_japonicum___Haloferax_mediterranei 2033.865
#> Salarchaeum_japonicum___Haloferax_volcanii 2303.140
#> aligned_width_query_Total
#> Haloferax_mediterranei___Haloferax_volcanii 2516428
#> Haloferax_mediterranei___Salarchaeum_japonicum 1335361
#> Haloferax_volcanii___Haloferax_mediterranei 2501929
#> Haloferax_volcanii___Salarchaeum_japonicum 1415992
#> Salarchaeum_japonicum___Haloferax_mediterranei 1339452
#> Salarchaeum_japonicum___Haloferax_volcanii 1441079
#> aligned_width_query_N
#> Haloferax_mediterranei___Haloferax_volcanii 953
#> Haloferax_mediterranei___Salarchaeum_japonicum 1130
#> Haloferax_volcanii___Haloferax_mediterranei 1008
#> Haloferax_volcanii___Salarchaeum_japonicum 1098
#> Salarchaeum_japonicum___Haloferax_mediterranei 1151
#> Salarchaeum_japonicum___Haloferax_volcanii 1100
#> chain_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 102
#> Haloferax_mediterranei___Salarchaeum_japonicum 76
#> Haloferax_volcanii___Haloferax_mediterranei 102
#> Haloferax_volcanii___Salarchaeum_japonicum 76
#> Salarchaeum_japonicum___Haloferax_mediterranei 76
#> Salarchaeum_japonicum___Haloferax_volcanii 76
#> chain_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 664.75
#> Haloferax_mediterranei___Salarchaeum_japonicum 656.50
#> Haloferax_volcanii___Haloferax_mediterranei 688.00
#> Haloferax_volcanii___Salarchaeum_japonicum 664.50
#> Salarchaeum_japonicum___Haloferax_mediterranei 642.25
#> Salarchaeum_japonicum___Haloferax_volcanii 665.00
#> chain_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1460.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 1272.5
#> Haloferax_volcanii___Haloferax_mediterranei 1584.0
#> Haloferax_volcanii___Salarchaeum_japonicum 1185.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 1227.5
#> Salarchaeum_japonicum___Haloferax_volcanii 1161.0
#> chain_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 12025.552
#> Haloferax_mediterranei___Salarchaeum_japonicum 2962.319
#> Haloferax_volcanii___Haloferax_mediterranei 11835.645
#> Haloferax_volcanii___Salarchaeum_japonicum 2770.793
#> Salarchaeum_japonicum___Haloferax_mediterranei 2524.070
#> Salarchaeum_japonicum___Haloferax_volcanii 2485.457
#> chain_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 8954.75
#> Haloferax_mediterranei___Salarchaeum_japonicum 3465.25
#> Haloferax_volcanii___Haloferax_mediterranei 9155.50
#> Haloferax_volcanii___Salarchaeum_japonicum 3301.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 2980.00
#> Salarchaeum_japonicum___Haloferax_volcanii 2899.00
#> chain_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 157290
#> Haloferax_mediterranei___Salarchaeum_japonicum 30070
#> Haloferax_volcanii___Haloferax_mediterranei 168677
#> Haloferax_volcanii___Salarchaeum_japonicum 75091
#> Salarchaeum_japonicum___Haloferax_mediterranei 22286
#> Salarchaeum_japonicum___Haloferax_volcanii 58986
#> chain_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 63618.880
#> Haloferax_mediterranei___Salarchaeum_japonicum 9179.978
#> Haloferax_volcanii___Haloferax_mediterranei 63224.080
#> Haloferax_volcanii___Salarchaeum_japonicum 10356.492
#> Salarchaeum_japonicum___Haloferax_mediterranei 6943.589
#> Salarchaeum_japonicum___Haloferax_volcanii 8600.512
#> chain_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 3006388
#> Haloferax_mediterranei___Salarchaeum_japonicum 1854412
#> Haloferax_volcanii___Haloferax_mediterranei 2970747
#> Haloferax_volcanii___Salarchaeum_japonicum 1870285
#> Salarchaeum_japonicum___Haloferax_mediterranei 1585116
#> Salarchaeum_japonicum___Haloferax_volcanii 1675198
#> chain_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 250
#> Haloferax_mediterranei___Salarchaeum_japonicum 626
#> Haloferax_volcanii___Haloferax_mediterranei 251
#> Haloferax_volcanii___Salarchaeum_japonicum 675
#> Salarchaeum_japonicum___Haloferax_mediterranei 628
#> Salarchaeum_japonicum___Haloferax_volcanii 674
#> chain_width_query_Min
#> Haloferax_mediterranei___Haloferax_volcanii 102
#> Haloferax_mediterranei___Salarchaeum_japonicum 76
#> Haloferax_volcanii___Haloferax_mediterranei 102
#> Haloferax_volcanii___Salarchaeum_japonicum 76
#> Salarchaeum_japonicum___Haloferax_mediterranei 76
#> Salarchaeum_japonicum___Haloferax_volcanii 76
#> chain_width_query_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 685.75
#> Haloferax_mediterranei___Salarchaeum_japonicum 652.50
#> Haloferax_volcanii___Haloferax_mediterranei 686.50
#> Haloferax_volcanii___Salarchaeum_japonicum 664.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 640.00
#> Salarchaeum_japonicum___Haloferax_volcanii 664.25
#> chain_width_query_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1575.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 1243.5
#> Haloferax_volcanii___Haloferax_mediterranei 1487.0
#> Haloferax_volcanii___Salarchaeum_japonicum 1162.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 1258.5
#> Salarchaeum_japonicum___Haloferax_volcanii 1164.0
#> chain_width_query_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 11888.996
#> Haloferax_mediterranei___Salarchaeum_japonicum 2538.845
#> Haloferax_volcanii___Haloferax_mediterranei 11951.837
#> Haloferax_volcanii___Salarchaeum_japonicum 2466.474
#> Salarchaeum_japonicum___Haloferax_mediterranei 2948.822
#> Salarchaeum_japonicum___Haloferax_volcanii 2775.111
#> chain_width_query_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 9232.75
#> Haloferax_mediterranei___Salarchaeum_japonicum 3055.00
#> Haloferax_volcanii___Haloferax_mediterranei 8792.00
#> Haloferax_volcanii___Salarchaeum_japonicum 2875.50
#> Salarchaeum_japonicum___Haloferax_mediterranei 3407.50
#> Salarchaeum_japonicum___Haloferax_volcanii 3461.75
#> chain_width_query_Max
#> Haloferax_mediterranei___Haloferax_volcanii 168677
#> Haloferax_mediterranei___Salarchaeum_japonicum 22286
#> Haloferax_volcanii___Haloferax_mediterranei 157290
#> Haloferax_volcanii___Salarchaeum_japonicum 58986
#> Salarchaeum_japonicum___Haloferax_mediterranei 31812
#> Salarchaeum_japonicum___Haloferax_volcanii 75091
#> chain_width_query_L50
#> Haloferax_mediterranei___Haloferax_volcanii 64429.128
#> Haloferax_mediterranei___Salarchaeum_japonicum 6795.269
#> Haloferax_volcanii___Haloferax_mediterranei 62774.271
#> Haloferax_volcanii___Salarchaeum_japonicum 8298.316
#> Salarchaeum_japonicum___Haloferax_mediterranei 9516.304
#> Salarchaeum_japonicum___Haloferax_volcanii 10630.056
#> chain_width_query_Total
#> Haloferax_mediterranei___Haloferax_volcanii 2972249
#> Haloferax_mediterranei___Salarchaeum_japonicum 1589317
#> Haloferax_volcanii___Haloferax_mediterranei 2999911
#> Haloferax_volcanii___Salarchaeum_japonicum 1664870
#> Salarchaeum_japonicum___Haloferax_mediterranei 1851860
#> Salarchaeum_japonicum___Haloferax_volcanii 1870425
#> chain_width_query_N
#> Haloferax_mediterranei___Haloferax_volcanii 250
#> Haloferax_mediterranei___Salarchaeum_japonicum 626
#> Haloferax_volcanii___Haloferax_mediterranei 251
#> Haloferax_volcanii___Salarchaeum_japonicum 675
#> Salarchaeum_japonicum___Haloferax_mediterranei 628
#> Salarchaeum_japonicum___Haloferax_volcanii 674
#> collinear_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 74
#> Haloferax_mediterranei___Salarchaeum_japonicum 73
#> Haloferax_volcanii___Haloferax_mediterranei 74
#> Haloferax_volcanii___Salarchaeum_japonicum 77
#> Salarchaeum_japonicum___Haloferax_mediterranei 73
#> Salarchaeum_japonicum___Haloferax_volcanii 75
#> collinear_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 870.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 633.75
#> Haloferax_volcanii___Haloferax_mediterranei 836.50
#> Haloferax_volcanii___Salarchaeum_japonicum 711.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 606.00
#> Salarchaeum_japonicum___Haloferax_volcanii 712.50
#> collinear_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 1905.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 1034.0
#> Haloferax_volcanii___Haloferax_mediterranei 1832.5
#> Haloferax_volcanii___Salarchaeum_japonicum 1156.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 1005.0
#> Salarchaeum_japonicum___Haloferax_volcanii 1151.0
#> collinear_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 2907.272
#> Haloferax_mediterranei___Salarchaeum_japonicum 1316.394
#> Haloferax_volcanii___Haloferax_mediterranei 2710.034
#> Haloferax_volcanii___Salarchaeum_japonicum 1491.551
#> Salarchaeum_japonicum___Haloferax_mediterranei 1251.471
#> Salarchaeum_japonicum___Haloferax_volcanii 1443.375
#> collinear_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 3987.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 1603.50
#> Haloferax_volcanii___Haloferax_mediterranei 3815.75
#> Haloferax_volcanii___Salarchaeum_japonicum 1926.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 1516.00
#> Salarchaeum_japonicum___Haloferax_volcanii 1868.75
#> collinear_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 24678
#> Haloferax_mediterranei___Salarchaeum_japonicum 14605
#> Haloferax_volcanii___Haloferax_mediterranei 24657
#> Haloferax_volcanii___Salarchaeum_japonicum 14121
#> Salarchaeum_japonicum___Haloferax_mediterranei 14219
#> Salarchaeum_japonicum___Haloferax_volcanii 13840
#> collinear_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 6043.839
#> Haloferax_mediterranei___Salarchaeum_japonicum 2335.696
#> Haloferax_volcanii___Haloferax_mediterranei 5583.845
#> Haloferax_volcanii___Salarchaeum_japonicum 2570.590
#> Salarchaeum_japonicum___Haloferax_mediterranei 2209.750
#> Salarchaeum_japonicum___Haloferax_volcanii 2443.543
#> collinear_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 2363612
#> Haloferax_mediterranei___Salarchaeum_japonicum 947804
#> Haloferax_volcanii___Haloferax_mediterranei 2357730
#> Haloferax_volcanii___Salarchaeum_japonicum 926253
#> Salarchaeum_japonicum___Haloferax_mediterranei 927340
#> Salarchaeum_japonicum___Haloferax_volcanii 900666
#> collinear_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 813
#> Haloferax_mediterranei___Salarchaeum_japonicum 720
#> Haloferax_volcanii___Haloferax_mediterranei 870
#> Haloferax_volcanii___Salarchaeum_japonicum 621
#> Salarchaeum_japonicum___Haloferax_mediterranei 741
#> Salarchaeum_japonicum___Haloferax_volcanii 624
#> isolated_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 102
#> Haloferax_mediterranei___Salarchaeum_japonicum 76
#> Haloferax_volcanii___Haloferax_mediterranei 102
#> Haloferax_volcanii___Salarchaeum_japonicum 76
#> Salarchaeum_japonicum___Haloferax_mediterranei 76
#> Salarchaeum_japonicum___Haloferax_volcanii 76
#> isolated_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 331.75
#> Haloferax_mediterranei___Salarchaeum_japonicum 479.00
#> Haloferax_volcanii___Haloferax_mediterranei 334.50
#> Haloferax_volcanii___Salarchaeum_japonicum 531.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 447.25
#> Salarchaeum_japonicum___Haloferax_volcanii 534.50
#> isolated_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 748.5
#> Haloferax_mediterranei___Salarchaeum_japonicum 809.5
#> Haloferax_volcanii___Haloferax_mediterranei 775.5
#> Haloferax_volcanii___Salarchaeum_japonicum 861.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 794.0
#> Salarchaeum_japonicum___Haloferax_volcanii 847.5
#> isolated_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 1062.8714
#> Haloferax_mediterranei___Salarchaeum_japonicum 994.4220
#> Haloferax_volcanii___Haloferax_mediterranei 1074.4275
#> Haloferax_volcanii___Salarchaeum_japonicum 1083.8679
#> Salarchaeum_japonicum___Haloferax_mediterranei 959.6585
#> Salarchaeum_japonicum___Haloferax_volcanii 1079.1639
#> isolated_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 1214.75
#> Haloferax_mediterranei___Salarchaeum_japonicum 1286.25
#> Haloferax_volcanii___Haloferax_mediterranei 1220.75
#> Haloferax_volcanii___Salarchaeum_japonicum 1293.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 1223.00
#> Salarchaeum_japonicum___Haloferax_volcanii 1257.50
#> isolated_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 11539
#> Haloferax_mediterranei___Salarchaeum_japonicum 6209
#> Haloferax_volcanii___Haloferax_mediterranei 11522
#> Haloferax_volcanii___Salarchaeum_japonicum 6207
#> Salarchaeum_japonicum___Haloferax_mediterranei 6135
#> Salarchaeum_japonicum___Haloferax_volcanii 8407
#> isolated_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 2857.160
#> Haloferax_mediterranei___Salarchaeum_japonicum 1535.210
#> Haloferax_volcanii___Haloferax_mediterranei 2882.358
#> Haloferax_volcanii___Salarchaeum_japonicum 1824.105
#> Salarchaeum_japonicum___Haloferax_mediterranei 1492.970
#> Salarchaeum_japonicum___Haloferax_volcanii 1892.540
#> isolated_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 148802
#> Haloferax_mediterranei___Salarchaeum_japonicum 407713
#> Haloferax_volcanii___Haloferax_mediterranei 148271
#> Haloferax_volcanii___Salarchaeum_japonicum 517005
#> Salarchaeum_japonicum___Haloferax_mediterranei 393460
#> Salarchaeum_japonicum___Haloferax_volcanii 513682
#> isolated_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 140
#> Haloferax_mediterranei___Salarchaeum_japonicum 410
#> Haloferax_volcanii___Haloferax_mediterranei 138
#> Haloferax_volcanii___Salarchaeum_japonicum 477
#> Salarchaeum_japonicum___Haloferax_mediterranei 410
#> Salarchaeum_japonicum___Haloferax_volcanii 476
#> bridge_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 1
#> Haloferax_mediterranei___Salarchaeum_japonicum 14
#> Haloferax_volcanii___Haloferax_mediterranei 1
#> Haloferax_volcanii___Salarchaeum_japonicum 8
#> Salarchaeum_japonicum___Haloferax_mediterranei 1
#> Salarchaeum_japonicum___Haloferax_volcanii 1
#> bridge_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 132.25
#> Haloferax_mediterranei___Salarchaeum_japonicum 205.75
#> Haloferax_volcanii___Haloferax_mediterranei 92.00
#> Haloferax_volcanii___Salarchaeum_japonicum 212.50
#> Salarchaeum_japonicum___Haloferax_mediterranei 90.00
#> Salarchaeum_japonicum___Haloferax_volcanii 82.00
#> bridge_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 229.5
#> Haloferax_mediterranei___Salarchaeum_japonicum 410.0
#> Haloferax_volcanii___Haloferax_mediterranei 165.0
#> Haloferax_volcanii___Salarchaeum_japonicum 445.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 209.0
#> Salarchaeum_japonicum___Haloferax_volcanii 217.5
#> bridge_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 707.5602
#> Haloferax_mediterranei___Salarchaeum_japonicum 989.8710
#> Haloferax_volcanii___Haloferax_mediterranei 622.1499
#> Haloferax_volcanii___Salarchaeum_japonicum 1009.5201
#> Salarchaeum_japonicum___Haloferax_mediterranei 511.2495
#> Salarchaeum_japonicum___Haloferax_volcanii 621.0714
#> bridge_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 655.5
#> Haloferax_mediterranei___Salarchaeum_japonicum 1058.5
#> Haloferax_volcanii___Haloferax_mediterranei 465.0
#> Haloferax_volcanii___Salarchaeum_japonicum 1177.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 572.0
#> Salarchaeum_japonicum___Haloferax_volcanii 606.5
#> bridge_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 24097
#> Haloferax_mediterranei___Salarchaeum_japonicum 24174
#> Haloferax_volcanii___Haloferax_mediterranei 55565
#> Haloferax_volcanii___Salarchaeum_japonicum 47532
#> Salarchaeum_japonicum___Haloferax_mediterranei 10772
#> Salarchaeum_japonicum___Haloferax_volcanii 31759
#> bridge_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 4429.566
#> Haloferax_mediterranei___Salarchaeum_japonicum 4057.568
#> Haloferax_volcanii___Haloferax_mediterranei 9966.593
#> Haloferax_volcanii___Salarchaeum_japonicum 7423.215
#> Salarchaeum_japonicum___Haloferax_mediterranei 2098.948
#> Salarchaeum_japonicum___Haloferax_volcanii 5588.236
#> bridge_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 493877
#> Haloferax_mediterranei___Salarchaeum_japonicum 498895
#> Haloferax_volcanii___Haloferax_mediterranei 464746
#> Haloferax_volcanii___Salarchaeum_japonicum 427027
#> Salarchaeum_japonicum___Haloferax_mediterranei 264316
#> Salarchaeum_japonicum___Haloferax_volcanii 260850
#> bridge_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 698
#> Haloferax_mediterranei___Salarchaeum_japonicum 504
#> Haloferax_volcanii___Haloferax_mediterranei 747
#> Haloferax_volcanii___Salarchaeum_japonicum 423
#> Salarchaeum_japonicum___Haloferax_mediterranei 517
#> Salarchaeum_japonicum___Haloferax_volcanii 420
#> breakpoint_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 4
#> Haloferax_mediterranei___Salarchaeum_japonicum 23
#> Haloferax_volcanii___Haloferax_mediterranei 1
#> Haloferax_volcanii___Salarchaeum_japonicum 13
#> Salarchaeum_japonicum___Haloferax_mediterranei 1
#> Salarchaeum_japonicum___Haloferax_volcanii 1
#> breakpoint_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 188.50
#> Haloferax_mediterranei___Salarchaeum_japonicum 211.25
#> Haloferax_volcanii___Haloferax_mediterranei 170.00
#> Haloferax_volcanii___Salarchaeum_japonicum 192.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 97.00
#> Salarchaeum_japonicum___Haloferax_volcanii 74.25
#> breakpoint_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 941.5
#> Haloferax_mediterranei___Salarchaeum_japonicum 801.5
#> Haloferax_volcanii___Haloferax_mediterranei 714.0
#> Haloferax_volcanii___Salarchaeum_japonicum 789.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 359.0
#> Salarchaeum_japonicum___Haloferax_volcanii 269.5
#> breakpoint_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 3587.335
#> Haloferax_mediterranei___Salarchaeum_japonicum 3170.754
#> Haloferax_volcanii___Haloferax_mediterranei 4086.273
#> Haloferax_volcanii___Salarchaeum_japonicum 2989.345
#> Salarchaeum_japonicum___Haloferax_mediterranei 1180.571
#> Salarchaeum_japonicum___Haloferax_volcanii 991.991
#> breakpoint_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 4430.50
#> Haloferax_mediterranei___Salarchaeum_japonicum 2700.25
#> Haloferax_volcanii___Haloferax_mediterranei 3684.00
#> Haloferax_volcanii___Salarchaeum_japonicum 2298.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 1289.00
#> Salarchaeum_japonicum___Haloferax_volcanii 1098.50
#> breakpoint_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 49823
#> Haloferax_mediterranei___Salarchaeum_japonicum 73976
#> Haloferax_volcanii___Haloferax_mediterranei 62332
#> Haloferax_volcanii___Salarchaeum_japonicum 70437
#> Salarchaeum_japonicum___Haloferax_mediterranei 41890
#> Salarchaeum_japonicum___Haloferax_volcanii 32528
#> breakpoint_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 17238.476
#> Haloferax_mediterranei___Salarchaeum_japonicum 20663.367
#> Haloferax_volcanii___Haloferax_mediterranei 21309.248
#> Haloferax_volcanii___Salarchaeum_japonicum 20294.340
#> Salarchaeum_japonicum___Haloferax_mediterranei 7333.855
#> Salarchaeum_japonicum___Haloferax_volcanii 5529.435
#> breakpoint_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 868135
#> Haloferax_mediterranei___Salarchaeum_japonicum 1972209
#> Haloferax_volcanii___Haloferax_mediterranei 1001137
#> Haloferax_volcanii___Salarchaeum_japonicum 2008840
#> Salarchaeum_japonicum___Haloferax_mediterranei 735496
#> Salarchaeum_japonicum___Haloferax_volcanii 660666
#> breakpoint_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 242
#> Haloferax_mediterranei___Salarchaeum_japonicum 622
#> Haloferax_volcanii___Haloferax_mediterranei 245
#> Haloferax_volcanii___Salarchaeum_japonicum 672
#> Salarchaeum_japonicum___Haloferax_mediterranei 623
#> Salarchaeum_japonicum___Haloferax_volcanii 666
#> inverted_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 57065
#> Haloferax_mediterranei___Salarchaeum_japonicum 1057
#> Haloferax_volcanii___Haloferax_mediterranei 19645
#> Haloferax_volcanii___Salarchaeum_japonicum 596
#> Salarchaeum_japonicum___Haloferax_mediterranei 956
#> Salarchaeum_japonicum___Haloferax_volcanii 957
#> inverted_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 57065.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 1213.0
#> Haloferax_volcanii___Haloferax_mediterranei 19645.0
#> Haloferax_volcanii___Salarchaeum_japonicum 997.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 1139.0
#> Salarchaeum_japonicum___Haloferax_volcanii 1140.5
#> inverted_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 57065
#> Haloferax_mediterranei___Salarchaeum_japonicum 1369
#> Haloferax_volcanii___Haloferax_mediterranei 19645
#> Haloferax_volcanii___Salarchaeum_japonicum 1398
#> Salarchaeum_japonicum___Haloferax_mediterranei 1322
#> Salarchaeum_japonicum___Haloferax_volcanii 1324
#> inverted_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 57065.000
#> Haloferax_mediterranei___Salarchaeum_japonicum 7989.000
#> Haloferax_volcanii___Haloferax_mediterranei 19645.000
#> Haloferax_volcanii___Salarchaeum_japonicum 2725.000
#> Salarchaeum_japonicum___Haloferax_mediterranei 3177.333
#> Salarchaeum_japonicum___Haloferax_volcanii 1498.333
#> inverted_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 57065.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 11455.0
#> Haloferax_volcanii___Haloferax_mediterranei 19645.0
#> Haloferax_volcanii___Salarchaeum_japonicum 3789.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 4288.0
#> Salarchaeum_japonicum___Haloferax_volcanii 1769.0
#> inverted_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 57065
#> Haloferax_mediterranei___Salarchaeum_japonicum 21541
#> Haloferax_volcanii___Haloferax_mediterranei 19645
#> Haloferax_volcanii___Salarchaeum_japonicum 6181
#> Salarchaeum_japonicum___Haloferax_mediterranei 7254
#> Salarchaeum_japonicum___Haloferax_volcanii 2214
#> inverted_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 57065.000
#> Haloferax_mediterranei___Salarchaeum_japonicum 19485.380
#> Haloferax_volcanii___Haloferax_mediterranei 19645.000
#> Haloferax_volcanii___Salarchaeum_japonicum 4955.888
#> Salarchaeum_japonicum___Haloferax_mediterranei 5799.637
#> Salarchaeum_japonicum___Haloferax_volcanii 1684.232
#> inverted_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 57065
#> Haloferax_mediterranei___Salarchaeum_japonicum 23967
#> Haloferax_volcanii___Haloferax_mediterranei 19645
#> Haloferax_volcanii___Salarchaeum_japonicum 8175
#> Salarchaeum_japonicum___Haloferax_mediterranei 9532
#> Salarchaeum_japonicum___Haloferax_volcanii 4495
#> inverted_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 1
#> Haloferax_mediterranei___Salarchaeum_japonicum 3
#> Haloferax_volcanii___Haloferax_mediterranei 1
#> Haloferax_volcanii___Salarchaeum_japonicum 3
#> Salarchaeum_japonicum___Haloferax_mediterranei 3
#> Salarchaeum_japonicum___Haloferax_volcanii 3
#> translocated_width_target_Min
#> Haloferax_mediterranei___Haloferax_volcanii 138
#> Haloferax_mediterranei___Salarchaeum_japonicum 79
#> Haloferax_volcanii___Haloferax_mediterranei 145
#> Haloferax_volcanii___Salarchaeum_japonicum 306
#> Salarchaeum_japonicum___Haloferax_mediterranei 114
#> Salarchaeum_japonicum___Haloferax_volcanii 180
#> translocated_width_target_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 2603.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 946.50
#> Haloferax_volcanii___Haloferax_mediterranei 5103.25
#> Haloferax_volcanii___Salarchaeum_japonicum 1266.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 1154.25
#> Salarchaeum_japonicum___Haloferax_volcanii 828.50
#> translocated_width_target_Median
#> Haloferax_mediterranei___Haloferax_volcanii 8382.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 2157.5
#> Haloferax_volcanii___Haloferax_mediterranei 26578.0
#> Haloferax_volcanii___Salarchaeum_japonicum 3096.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 2408.5
#> Salarchaeum_japonicum___Haloferax_volcanii 2314.0
#> translocated_width_target_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 21093.457
#> Haloferax_mediterranei___Salarchaeum_japonicum 3722.810
#> Haloferax_volcanii___Haloferax_mediterranei 37144.467
#> Haloferax_volcanii___Salarchaeum_japonicum 5522.333
#> Salarchaeum_japonicum___Haloferax_mediterranei 4427.120
#> Salarchaeum_japonicum___Haloferax_volcanii 3326.326
#> translocated_width_target_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 28703.00
#> Haloferax_mediterranei___Salarchaeum_japonicum 5175.25
#> Haloferax_volcanii___Haloferax_mediterranei 50138.50
#> Haloferax_volcanii___Salarchaeum_japonicum 5494.00
#> Salarchaeum_japonicum___Haloferax_mediterranei 6228.00
#> Salarchaeum_japonicum___Haloferax_volcanii 4839.75
#> translocated_width_target_Max
#> Haloferax_mediterranei___Haloferax_volcanii 124710
#> Haloferax_mediterranei___Salarchaeum_japonicum 16846
#> Haloferax_volcanii___Haloferax_mediterranei 168677
#> Haloferax_volcanii___Salarchaeum_japonicum 75091
#> Salarchaeum_japonicum___Haloferax_mediterranei 17177
#> Salarchaeum_japonicum___Haloferax_volcanii 14780
#> translocated_width_target_L50
#> Haloferax_mediterranei___Haloferax_volcanii 57697.257
#> Haloferax_mediterranei___Salarchaeum_japonicum 7715.236
#> Haloferax_volcanii___Haloferax_mediterranei 77979.208
#> Haloferax_volcanii___Salarchaeum_japonicum 26000.059
#> Salarchaeum_japonicum___Haloferax_mediterranei 8710.173
#> Salarchaeum_japonicum___Haloferax_volcanii 6264.928
#> translocated_width_target_Total
#> Haloferax_mediterranei___Haloferax_volcanii 738271
#> Haloferax_mediterranei___Salarchaeum_japonicum 215923
#> Haloferax_volcanii___Haloferax_mediterranei 1114334
#> Haloferax_volcanii___Salarchaeum_japonicum 314773
#> Salarchaeum_japonicum___Haloferax_mediterranei 221356
#> Salarchaeum_japonicum___Haloferax_volcanii 153011
#> translocated_width_target_N
#> Haloferax_mediterranei___Haloferax_volcanii 35
#> Haloferax_mediterranei___Salarchaeum_japonicum 58
#> Haloferax_volcanii___Haloferax_mediterranei 30
#> Haloferax_volcanii___Salarchaeum_japonicum 57
#> Salarchaeum_japonicum___Haloferax_mediterranei 50
#> Salarchaeum_japonicum___Haloferax_volcanii 46
#> guessed_target_length_Min
#> Haloferax_mediterranei___Haloferax_volcanii 131976
#> Haloferax_mediterranei___Salarchaeum_japonicum 131976
#> Haloferax_volcanii___Haloferax_mediterranei 85093
#> Haloferax_volcanii___Salarchaeum_japonicum 437907
#> Salarchaeum_japonicum___Haloferax_mediterranei 135208
#> Salarchaeum_japonicum___Haloferax_volcanii 135208
#> guessed_target_length_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 274425.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 274425.0
#> Haloferax_volcanii___Haloferax_mediterranei 349703.5
#> Haloferax_volcanii___Salarchaeum_japonicum 536847.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 652424.8
#> Salarchaeum_japonicum___Haloferax_volcanii 652424.8
#> guessed_target_length_Median
#> Haloferax_mediterranei___Haloferax_volcanii 413306.5
#> Haloferax_mediterranei___Salarchaeum_japonicum 413306.5
#> Haloferax_volcanii___Haloferax_mediterranei 536847.0
#> Haloferax_volcanii___Salarchaeum_japonicum 635787.0
#> Salarchaeum_japonicum___Haloferax_mediterranei 1169641.5
#> Salarchaeum_japonicum___Haloferax_volcanii 1169641.5
#> guessed_target_length_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 976869.2
#> Haloferax_mediterranei___Salarchaeum_japonicum 976869.2
#> Haloferax_volcanii___Haloferax_mediterranei 1001636.2
#> Haloferax_volcanii___Salarchaeum_japonicum 1307150.7
#> Salarchaeum_japonicum___Haloferax_mediterranei 1169641.5
#> Salarchaeum_japonicum___Haloferax_volcanii 1169641.5
#> guessed_target_length_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 1115751
#> Haloferax_mediterranei___Salarchaeum_japonicum 1115751
#> Haloferax_volcanii___Haloferax_mediterranei 1188780
#> Haloferax_volcanii___Salarchaeum_japonicum 1741772
#> Salarchaeum_japonicum___Haloferax_mediterranei 1686858
#> Salarchaeum_japonicum___Haloferax_volcanii 1686858
#> guessed_target_length_Max
#> Haloferax_mediterranei___Haloferax_volcanii 2948888
#> Haloferax_mediterranei___Salarchaeum_japonicum 2948888
#> Haloferax_volcanii___Haloferax_mediterranei 2847758
#> Haloferax_volcanii___Salarchaeum_japonicum 2847758
#> Salarchaeum_japonicum___Haloferax_mediterranei 2204075
#> Salarchaeum_japonicum___Haloferax_volcanii 2204075
#> guessed_target_length_L50
#> Haloferax_mediterranei___Haloferax_volcanii 2321629
#> Haloferax_mediterranei___Salarchaeum_japonicum 2321629
#> Haloferax_volcanii___Haloferax_mediterranei 2174680
#> Haloferax_volcanii___Salarchaeum_japonicum 2220023
#> Salarchaeum_japonicum___Haloferax_mediterranei 2084497
#> Salarchaeum_japonicum___Haloferax_volcanii 2084497
#> guessed_target_length_Total
#> Haloferax_mediterranei___Haloferax_volcanii 3907477
#> Haloferax_mediterranei___Salarchaeum_japonicum 3907477
#> Haloferax_volcanii___Haloferax_mediterranei 4006545
#> Haloferax_volcanii___Salarchaeum_japonicum 3921452
#> Salarchaeum_japonicum___Haloferax_mediterranei 2339283
#> Salarchaeum_japonicum___Haloferax_volcanii 2339283
#> guessed_target_length_N
#> Haloferax_mediterranei___Haloferax_volcanii 4
#> Haloferax_mediterranei___Salarchaeum_japonicum 4
#> Haloferax_volcanii___Haloferax_mediterranei 4
#> Haloferax_volcanii___Salarchaeum_japonicum 3
#> Salarchaeum_japonicum___Haloferax_mediterranei 2
#> Salarchaeum_japonicum___Haloferax_volcanii 2
#> guessed_query_length_Min
#> Haloferax_mediterranei___Haloferax_volcanii 85093
#> Haloferax_mediterranei___Salarchaeum_japonicum 135208
#> Haloferax_volcanii___Haloferax_mediterranei 131976
#> Haloferax_volcanii___Salarchaeum_japonicum 135208
#> Salarchaeum_japonicum___Haloferax_mediterranei 131976
#> Salarchaeum_japonicum___Haloferax_volcanii 437907
#> guessed_query_length_Q1
#> Haloferax_mediterranei___Haloferax_volcanii 349703.5
#> Haloferax_mediterranei___Salarchaeum_japonicum 652424.8
#> Haloferax_volcanii___Haloferax_mediterranei 274425.0
#> Haloferax_volcanii___Salarchaeum_japonicum 652424.8
#> Salarchaeum_japonicum___Haloferax_mediterranei 274425.0
#> Salarchaeum_japonicum___Haloferax_volcanii 536847.0
#> guessed_query_length_Median
#> Haloferax_mediterranei___Haloferax_volcanii 536847.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 1169641.5
#> Haloferax_volcanii___Haloferax_mediterranei 413306.5
#> Haloferax_volcanii___Salarchaeum_japonicum 1169641.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 413306.5
#> Salarchaeum_japonicum___Haloferax_volcanii 635787.0
#> guessed_query_length_Mean
#> Haloferax_mediterranei___Haloferax_volcanii 1001636.2
#> Haloferax_mediterranei___Salarchaeum_japonicum 1169641.5
#> Haloferax_volcanii___Haloferax_mediterranei 976869.2
#> Haloferax_volcanii___Salarchaeum_japonicum 1169641.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 976869.2
#> Salarchaeum_japonicum___Haloferax_volcanii 1307150.7
#> guessed_query_length_Q3
#> Haloferax_mediterranei___Haloferax_volcanii 1188780
#> Haloferax_mediterranei___Salarchaeum_japonicum 1686858
#> Haloferax_volcanii___Haloferax_mediterranei 1115751
#> Haloferax_volcanii___Salarchaeum_japonicum 1686858
#> Salarchaeum_japonicum___Haloferax_mediterranei 1115751
#> Salarchaeum_japonicum___Haloferax_volcanii 1741772
#> guessed_query_length_Max
#> Haloferax_mediterranei___Haloferax_volcanii 2847758
#> Haloferax_mediterranei___Salarchaeum_japonicum 2204075
#> Haloferax_volcanii___Haloferax_mediterranei 2948888
#> Haloferax_volcanii___Salarchaeum_japonicum 2204075
#> Salarchaeum_japonicum___Haloferax_mediterranei 2948888
#> Salarchaeum_japonicum___Haloferax_volcanii 2847758
#> guessed_query_length_L50
#> Haloferax_mediterranei___Haloferax_volcanii 2174680
#> Haloferax_mediterranei___Salarchaeum_japonicum 2084497
#> Haloferax_volcanii___Haloferax_mediterranei 2321629
#> Haloferax_volcanii___Salarchaeum_japonicum 2084497
#> Salarchaeum_japonicum___Haloferax_mediterranei 2321629
#> Salarchaeum_japonicum___Haloferax_volcanii 2220023
#> guessed_query_length_Total
#> Haloferax_mediterranei___Haloferax_volcanii 4006545
#> Haloferax_mediterranei___Salarchaeum_japonicum 2339283
#> Haloferax_volcanii___Haloferax_mediterranei 3907477
#> Haloferax_volcanii___Salarchaeum_japonicum 2339283
#> Salarchaeum_japonicum___Haloferax_mediterranei 3907477
#> Salarchaeum_japonicum___Haloferax_volcanii 3921452
#> guessed_query_length_N
#> Haloferax_mediterranei___Haloferax_volcanii 4
#> Haloferax_mediterranei___Salarchaeum_japonicum 2
#> Haloferax_volcanii___Haloferax_mediterranei 4
#> Haloferax_volcanii___Salarchaeum_japonicum 2
#> Salarchaeum_japonicum___Haloferax_mediterranei 4
#> Salarchaeum_japonicum___Haloferax_volcanii 3
#> index_synteny_target
#> Haloferax_mediterranei___Haloferax_volcanii 0.9566903
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.9794079
#> Haloferax_volcanii___Haloferax_mediterranei 0.9493667
#> Haloferax_volcanii___Salarchaeum_japonicum 0.9802551
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.9416036
#> Salarchaeum_japonicum___Haloferax_volcanii 0.9388453
#> index_synteny_query
#> Haloferax_mediterranei___Haloferax_volcanii 0.9495392
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.9381620
#> Haloferax_volcanii___Haloferax_mediterranei 0.9565299
#> Haloferax_volcanii___Salarchaeum_japonicum 0.9395300
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.9824354
#> Salarchaeum_japonicum___Haloferax_volcanii 0.9809490
#> index_correlation_target
#> Haloferax_mediterranei___Haloferax_volcanii 0.2802520
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.0483147
#> Haloferax_volcanii___Haloferax_mediterranei 0.2720500
#> Haloferax_volcanii___Salarchaeum_japonicum -0.0631292
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.0568141
#> Salarchaeum_japonicum___Haloferax_volcanii -0.0661695
#> index_correlation_query
#> Haloferax_mediterranei___Haloferax_volcanii 0.2716429
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.0617428
#> Haloferax_volcanii___Haloferax_mediterranei 0.2813536
#> Haloferax_volcanii___Salarchaeum_japonicum -0.0620077
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.0434089
#> Salarchaeum_japonicum___Haloferax_volcanii -0.0687453
#> index_GOCvicinity4_target
#> Haloferax_mediterranei___Haloferax_volcanii 0.7957672
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.5383244
#> Haloferax_volcanii___Haloferax_mediterranei 0.8060000
#> Haloferax_volcanii___Salarchaeum_japonicum 0.4844322
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.5387969
#> Salarchaeum_japonicum___Haloferax_volcanii 0.4799270
#> index_GOCvicinity4_query
#> Haloferax_mediterranei___Haloferax_volcanii 0.7925926
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.5373002
#> Haloferax_volcanii___Haloferax_mediterranei 0.8100000
#> Haloferax_volcanii___Salarchaeum_japonicum 0.4826325
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.5415573
#> Salarchaeum_japonicum___Haloferax_volcanii 0.4872029
#> index_strandRand_target
#> Haloferax_mediterranei___Haloferax_volcanii 0.3237587
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.1153693
#> Haloferax_volcanii___Haloferax_mediterranei 0.3113347
#> Haloferax_volcanii___Salarchaeum_japonicum 0.0063010
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.0991838
#> Salarchaeum_japonicum___Haloferax_volcanii 0.0097741
#> index_strandRand_query
#> Haloferax_mediterranei___Haloferax_volcanii 0.3106642
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.0996966
#> Haloferax_volcanii___Haloferax_mediterranei 0.3242502
#> Haloferax_volcanii___Salarchaeum_japonicum 0.0143617
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.1145274
#> Salarchaeum_japonicum___Haloferax_volcanii 0.0094034
#> species1
#> Haloferax_mediterranei___Haloferax_volcanii Haloferax_mediterranei
#> Haloferax_mediterranei___Salarchaeum_japonicum Haloferax_mediterranei
#> Haloferax_volcanii___Haloferax_mediterranei Haloferax_volcanii
#> Haloferax_volcanii___Salarchaeum_japonicum Haloferax_volcanii
#> Salarchaeum_japonicum___Haloferax_mediterranei Salarchaeum_japonicum
#> Salarchaeum_japonicum___Haloferax_volcanii Salarchaeum_japonicum
#> species2
#> Haloferax_mediterranei___Haloferax_volcanii Haloferax_volcanii
#> Haloferax_mediterranei___Salarchaeum_japonicum Salarchaeum_japonicum
#> Haloferax_volcanii___Haloferax_mediterranei Haloferax_mediterranei
#> Haloferax_volcanii___Salarchaeum_japonicum Salarchaeum_japonicum
#> Salarchaeum_japonicum___Haloferax_mediterranei Haloferax_mediterranei
#> Salarchaeum_japonicum___Haloferax_volcanii Haloferax_volcanii
#> index_avg_strandRand
#> Haloferax_mediterranei___Haloferax_volcanii 0.31721145
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.10753295
#> Haloferax_volcanii___Haloferax_mediterranei 0.31779245
#> Haloferax_volcanii___Salarchaeum_japonicum 0.01033135
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.10685560
#> Salarchaeum_japonicum___Haloferax_volcanii 0.00958875
#> index_avg_synteny avg_chr_num
#> Haloferax_mediterranei___Haloferax_volcanii 0.9531148 4.0
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.9587850 3.0
#> Haloferax_volcanii___Haloferax_mediterranei 0.9529483 4.0
#> Haloferax_volcanii___Salarchaeum_japonicum 0.9598925 2.5
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.9620195 3.0
#> Salarchaeum_japonicum___Haloferax_volcanii 0.9598971 2.5
#> percent_identity_local
#> Haloferax_mediterranei___Haloferax_volcanii 82.93045
#> Haloferax_mediterranei___Salarchaeum_japonicum 70.52701
#> Haloferax_volcanii___Haloferax_mediterranei 83.05427
#> Haloferax_volcanii___Salarchaeum_japonicum 72.50706
#> Salarchaeum_japonicum___Haloferax_mediterranei 70.69514
#> Salarchaeum_japonicum___Haloferax_volcanii 72.51139
#> percent_identity_global
#> Haloferax_mediterranei___Haloferax_volcanii 80.22559
#> Haloferax_mediterranei___Salarchaeum_japonicum 68.41933
#> Haloferax_volcanii___Haloferax_mediterranei 80.39441
#> Haloferax_volcanii___Salarchaeum_japonicum 69.79642
#> Salarchaeum_japonicum___Haloferax_mediterranei 68.65929
#> Salarchaeum_japonicum___Haloferax_volcanii 69.82446
#> percent_difference_local
#> Haloferax_mediterranei___Haloferax_volcanii 17.06955
#> Haloferax_mediterranei___Salarchaeum_japonicum 29.47299
#> Haloferax_volcanii___Haloferax_mediterranei 16.94573
#> Haloferax_volcanii___Salarchaeum_japonicum 27.49294
#> Salarchaeum_japonicum___Haloferax_mediterranei 29.30486
#> Salarchaeum_japonicum___Haloferax_volcanii 27.48861
#> percent_difference_global
#> Haloferax_mediterranei___Haloferax_volcanii 19.77441
#> Haloferax_mediterranei___Salarchaeum_japonicum 31.58067
#> Haloferax_volcanii___Haloferax_mediterranei 19.60559
#> Haloferax_volcanii___Salarchaeum_japonicum 30.20358
#> Salarchaeum_japonicum___Haloferax_mediterranei 31.34071
#> Salarchaeum_japonicum___Haloferax_volcanii 30.17554
#> index_avg_strandDiscord
#> Haloferax_mediterranei___Haloferax_volcanii 0.6827885
#> Haloferax_mediterranei___Salarchaeum_japonicum 0.8924671
#> Haloferax_volcanii___Haloferax_mediterranei 0.6822075
#> Haloferax_volcanii___Salarchaeum_japonicum 0.9896687
#> Salarchaeum_japonicum___Haloferax_mediterranei 0.8931444
#> Salarchaeum_japonicum___Haloferax_volcanii 0.9904112
#> percent_aligned
#> Haloferax_mediterranei___Haloferax_volcanii 64.3
#> Haloferax_mediterranei___Salarchaeum_japonicum 34.7
#> Haloferax_volcanii___Haloferax_mediterranei 62.5
#> Haloferax_volcanii___Salarchaeum_japonicum 36.8
#> Salarchaeum_japonicum___Haloferax_mediterranei 56.5
#> Salarchaeum_japonicum___Haloferax_volcanii 60.5
#> lab
#> Haloferax_mediterranei___Haloferax_volcanii Haloferax_volcanii\nHaloferax_mediterranei
#> Haloferax_mediterranei___Salarchaeum_japonicum Salarchaeum_japonicum\nHaloferax_mediterranei
#> Haloferax_volcanii___Haloferax_mediterranei Haloferax_volcanii\nHaloferax_mediterranei
#> Haloferax_volcanii___Salarchaeum_japonicum Salarchaeum_japonicum\nHaloferax_volcanii
#> Salarchaeum_japonicum___Haloferax_mediterranei Salarchaeum_japonicum\nHaloferax_mediterranei
#> Salarchaeum_japonicum___Haloferax_volcanii Salarchaeum_japonicum\nHaloferax_volcanii
#> MRCA focalClade focalColor
#> Haloferax_mediterranei___Haloferax_volcanii 8 Haloferax genus green3
#> Haloferax_mediterranei___Salarchaeum_japonicum 7 <NA> <NA>
#> Haloferax_volcanii___Haloferax_mediterranei 8 Haloferax genus green3
#> Haloferax_volcanii___Salarchaeum_japonicum 7 <NA> <NA>
#> Salarchaeum_japonicum___Haloferax_mediterranei 7 <NA> <NA>
#> Salarchaeum_japonicum___Haloferax_volcanii 7 <NA> <NA>